Research
Bioinformatic

Bionode

Description and applications

BioNode is Node.js JavaScript library for client and server side bioinformatics. Bionode provides pipeable UNIX command line tools and JavaScript APIs for bioinformatic analysis workflows.

Used in production. Development ongoing. Contributors welcome.

Examples:

  • Retrieves all the metadata about formicidae on the assembly database and save into a Dat repository
  • Download all Sequence Read Archives for arthropoda and extract a fastq for each
  • Download all bacteria gff files.

Publications

Access: http://bionode.io

Keywords

bioinformatic tool, JavaScript library, genomics, transcriptomics

Dr Yannick Wurm

School of Biological and Chemical Sciences

Want access?

Get in touch with the Business Development Office smd-qmbusiness@qmul.ac.uk